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  5. Seita.9G061400.1

Seita.9G061400.1


Description : Unknown function


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G061400.1

Target Alias Description ECC score Gene Family Method Actions
A4A49_15921 No alias glycine-rich rna-binding protein 4, mitochondrial 0.05 Orthogroups_2024-Update
Bradi5g09510 No alias RNA binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Brara.C01346.1 No alias RNA editing factor *(ORRM2) 0.02 Orthogroups_2024-Update
Brara.G03194.1 No alias RNA editing factor *(ORRM3) 0.02 Orthogroups_2024-Update
GRMZM2G083783 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Orthogroups_2024-Update
Glyma.13G333700 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G110370.1 No alias RNA editing factor *(ORRM3) 0.03 Orthogroups_2024-Update
HORVU6Hr1G055440.1 No alias Unknown function 0.05 Orthogroups_2024-Update
MA_168323g0010 No alias (at1g60650 : 142.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
MA_481822g0010 No alias (at5g61030 : 139.0) encodes a glycine-rich RNA binding... 0.05 Orthogroups_2024-Update
MA_8928476g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_8928477g0010 No alias (at5g61030 : 124.0) encodes a glycine-rich RNA binding... 0.1 Orthogroups_2024-Update
PSME_00020927-RA No alias (at3g26420 : 152.0) Zinc finger-containing glycine-rich ... 0.04 Orthogroups_2024-Update
PSME_00048381-RA No alias (at5g61030 : 149.0) encodes a glycine-rich RNA binding... 0.02 Orthogroups_2024-Update
PSME_00055596-RA No alias (p49310|grp1_sinal : 142.0) Glycine-rich RNA-binding... 0.02 Orthogroups_2024-Update
Potri.011G130300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Seita.5G173500.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Solyc10g084630 No alias RNA-binding family protein (AHRD V3.3 *** A0A061ET74_THECC) 0.02 Orthogroups_2024-Update
Solyc11g008210 No alias Glycine-rich RNA-binding family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen10g023060 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 25 94
No external refs found!