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  5. Seita.9G063400.1

Seita.9G063400.1


Description : Qa-type SYP1-group component of SNARE membrane fusion complex


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G063400.1
Cluster HCAA Clusters: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
74098 No alias syntaxin of plants 124 0.04 Orthogroups_2024-Update
93442 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
A4A49_24964 No alias syntaxin-121 0.11 Orthogroups_2024-Update
At3g52400 No alias Syntaxin-122 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVC2] 0.03 Orthogroups_2024-Update
Bradi1g06372 No alias syntaxin of plants 121 0.01 Orthogroups_2024-Update
Bradi3g07970 No alias syntaxin of plants 124 0.03 Orthogroups_2024-Update
Bradi4g05940 No alias syntaxin of plants 131 0.05 Orthogroups_2024-Update
Brara.D00592.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
Brara.E03504.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Brara.F00751.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.04 Orthogroups_2024-Update
Brara.G00197.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
GRMZM2G021378 No alias syntaxin of plants 131 0.03 Orthogroups_2024-Update
GRMZM2G029270 No alias syntaxin of plants 124 0.07 Orthogroups_2024-Update
GRMZM2G414540 No alias syntaxin of plants 121 0.05 Orthogroups_2024-Update
HORVU3Hr1G115630.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
LOC_Os03g52650 No alias syntaxin-related protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_28961g0010 No alias (at1g11250 : 290.0) member of SYP12 Gene Family;... 0.06 Orthogroups_2024-Update
Mp7g13190.1 No alias SYP1-group Qa-type SNARE component 0.03 Orthogroups_2024-Update
PSME_00055228-RA No alias (at4g33990 : 129.0) embryo defective 2758 (EMB2758);... 0.03 Orthogroups_2024-Update
Potri.004G035400 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
Potri.006G202200 No alias syntaxin of plants 121 0.04 Orthogroups_2024-Update
Potri.013G056100 No alias syntaxin of plants 132 0.03 Orthogroups_2024-Update
Potri.016G068600 No alias syntaxin of plants 121 0.04 Orthogroups_2024-Update
Pp1s300_43V6 No alias qa-sso1 syntaxin1-syp12a-group 0.02 Orthogroups_2024-Update
Sobic.001G064900.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.11 Orthogroups_2024-Update
Sobic.008G115500.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.06 Orthogroups_2024-Update
Solyc01g006950 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.05 Orthogroups_2024-Update
Solyc10g081850 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.02 Orthogroups_2024-Update
Sopen07g026100 No alias SNARE domain 0.02 Orthogroups_2024-Update
Sopen10g032370 No alias SNARE domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004325 ferrochelatase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0018580 nitronate monooxygenase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 247 299
IPR006011 Syntaxin_N 43 246
No external refs found!