Seita.9G063900.1

Description : Unknown function

Gene families : OG_42_0006378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006378_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.9G063900.1
Cluster	HCAA Clusters: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method	Actions
At3g42860	No alias	DNA topoisomerase [Source:UniProtKB/TrEMBL;Acc:Q9M1L9]	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	16Dec
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predicted GO
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
BP	GO:0018193	peptidyl-amino acid modification	IEP	Predicted GO
BP	GO:0018208	peptidyl-proline modification	IEP	Predicted GO
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predicted GO
MF	GO:0051540	metal cluster binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	286	302
IPR001878	Znf_CCHC	98	114
IPR001878	Znf_CCHC	324	339
IPR010666	Znf_GRF	144	186
IPR010666	Znf_GRF	210	253

External Links

No external refs found!