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  5. Seita.9G067200.1

Seita.9G067200.1


Description : regulatory protein *(PIF) of red/far-red light perception & bHLH-type transcription factor


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G067200.1
Cluster HCAA Clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
39143 No alias phytochrome interacting factor 3 0.03 Orthogroups_2024-Update
A4A49_38454 No alias transcription factor pif5 0.04 Orthogroups_2024-Update
At2g20180 No alias Transcription factor PIF1... 0.05 Orthogroups_2024-Update
At3g59060 No alias Transcription factor PIF5... 0.04 Orthogroups_2024-Update
Brara.C02178.1 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
Brara.G00063.1 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
Brara.G01197.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I04061.1 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
GRMZM2G016756 No alias phytochrome interacting factor 4 0.05 Orthogroups_2024-Update
Glyma.02G282100 No alias phytochrome interacting factor 4 0.04 Orthogroups_2024-Update
Glyma.08G303900 No alias phytochrome interacting factor 4 0.03 Orthogroups_2024-Update
Glyma.18G115700 No alias phytochrome interacting factor 4 0.04 Orthogroups_2024-Update
Glyma.20G091200 No alias phytochrome interacting factor 3 0.03 Orthogroups_2024-Update
Kfl00086_0300 kfl00086_0300_v1.1 no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
LOC_Os03g43810 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s147_126V6 No alias helix-loop-helix dna-binding domain containing expressed 0.05 Orthogroups_2024-Update
Pp1s69_37V6 No alias dna binding 0.03 Orthogroups_2024-Update
Seita.9G160700.1 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
Sobic.001G068301.1 No alias bHLH-type transcription factor 0.08 Orthogroups_2024-Update
Sobic.001G158900.3 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
Solyc06g008030 No alias bHLH transcription factor 041 0.03 Orthogroups_2024-Update
Solyc07g043580 No alias bHLH transcription factor 052 0.04 Orthogroups_2024-Update
Solyc09g063010 No alias bHLH transcription factor 058 0.03 Orthogroups_2024-Update
Sopen07g023150 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0071569 protein ufmylation IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 236 282
No external refs found!