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  5. Seita.9G073900.1

Seita.9G073900.1


Description : component *(uS14) of small ribosomal-subunit (SSU) proteome


Gene families : OG_42_0002354 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G073900.1
Cluster HCAA Clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358556 No alias Ribosomal protein S14p/S29e family protein 0.01 Orthogroups_2024-Update
LOC_Os11g41610 No alias 40S ribosomal protein S29, putative, expressed 0.02 Orthogroups_2024-Update
Mp8g03910.1 No alias component RPS29 of SSU proteome 0.03 Orthogroups_2024-Update
Solyc06g073430 No alias Ribosomal protein S3 (AHRD V3.3 --* A0A0K1ZDA3_9SOLA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001209 Ribosomal_S14 55 104
No external refs found!