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  5. Seita.9G078500.1

Seita.9G078500.1


Description : component *(PetM/VII) of cytochrome b6/f complex


Gene families : OG_42_0006262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G078500.1
Cluster HCAA Clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Bradi1g07530 No alias cytochrome b6f complex subunit (petM), putative 0.05 Orthogroups_2024-Update
Glyma.07G163600 No alias cytochrome b6f complex subunit (petM), putative 0.04 Orthogroups_2024-Update
HORVU5Hr1G097870.1 No alias component *(PetM/VII) of cytochrome b6/f complex 0.06 Orthogroups_2024-Update
Kfl01253_g1 kfl01253_g1_v1.1 no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_10294942g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
Mp1g07170.1 No alias component PetM/VII of cytochrome b6/f complex 0.02 Orthogroups_2024-Update
Potri.004G147300 No alias cytochrome b6f complex subunit (petM), putative 0.02 Orthogroups_2024-Update
Potri.009G108700 No alias cytochrome b6f complex subunit (petM), putative 0.06 Orthogroups_2024-Update
Pp1s14_288V6 No alias plastoquinol-plastocyanin reductase 0.05 Orthogroups_2024-Update
Pp1s263_33V6 No alias plastoquinol-plastocyanin reductase 0.05 Orthogroups_2024-Update
Sobic.001G078000.1 No alias component *(PetM/VII) of cytochrome b6/f complex 0.07 Orthogroups_2024-Update
Solyc01g109040 No alias Cytochrome b6-f complex subunit 7 (AHRD V3.3 *** W9R158_9ROSA) 0.05 Orthogroups_2024-Update
Sopen01g051240 No alias PetM family of cytochrome b6f complex subunit 7 0.04 Orthogroups_2024-Update
Sopen10g022090 No alias PetM family of cytochrome b6f complex subunit 7 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009512 cytochrome b6f complex IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010206 photosystem II repair IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030091 protein repair IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012595 PetM_cyt_b6/f_cplx_su7 84 110
No external refs found!