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  5. Seita.9G084000.1

Seita.9G084000.1


Description : bHLH-type transcription factor


Gene families : OG_42_0000766 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000766_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G084000.1
Cluster HCAA Clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
A4A49_34941 No alias transcription factor bhlh112 0.02 Orthogroups_2024-Update
Brara.A02816.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Brara.A02882.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I01493.1 No alias bHLH-type transcription factor 0.01 Orthogroups_2024-Update
Glyma.13G249800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os01g01600 No alias ethylene-responsive protein related, putative, expressed 0.01 Orthogroups_2024-Update
MA_114573g0010 No alias (at3g20640 : 154.0) basic helix-loop-helix (bHLH)... 0.01 Orthogroups_2024-Update
Sopen02g024530 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen10g002570 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!