Description : MADS/AGL-type transcription factor
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.9G088700.1 | |
Cluster | HCAA Clusters: Cluster_167 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At2g03710 | No alias | Agamous-like MADS-box protein AGL3... | 0.03 | Orthogroups_2024-Update | |
GRMZM2G099522 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
HORVU6Hr1G002330.8 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
LOC_Os06g06750 | No alias | OsMADS5 - MADS-box family gene with MIKCc type-box, expressed | 0.02 | Orthogroups_2024-Update | |
MA_17919g0010 | No alias | (q6eu39|mads6_orysa : 111.0) MADS-box transcription... | 0.03 | Orthogroups_2024-Update | |
Potri.009G079000 | No alias | AGAMOUS-like 44 | 0.02 | Orthogroups_2024-Update | |
Solyc01g106170 | No alias | AGAMOUS-like MADS-box transcription factor (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Sopen01g037750 | No alias | K-box region | 0.03 | Orthogroups_2024-Update | |
Sopen03g002820 | No alias | SRF-type transcription factor (DNA-binding and... | 0.04 | Orthogroups_2024-Update | |
Sopen07g029280 | No alias | K-box region | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | 16Dec |
CC | GO:0005634 | nucleus | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
MF | GO:0046983 | protein dimerization activity | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
CC | GO:0005737 | cytoplasm | IEP | Predicted GO |
No external refs found! |