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  5. Seita.9G092700.1

Seita.9G092700.1


Description : assembly factor NDF5 involved in NDH complex assembly


Gene families : OG_42_0004373 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G092700.1
Cluster HCAA Clusters: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G011373 No alias NDH-dependent cyclic electron flow 5 0.02 Orthogroups_2024-Update
Glyma.16G153000 No alias NDH-dependent cyclic electron flow 5 0.05 Orthogroups_2024-Update
Potri.019G034100 No alias NDH-dependent cyclic electron flow 1 0.04 Orthogroups_2024-Update
Sobic.001G090200.1 No alias assembly factor NDF5 involved in NDH complex assembly 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!