1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G101000.1

Seita.9G101000.1


Description : Unknown function


Gene families : OG_42_0000247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G101000.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Bradi1g21260 No alias GRAM domain family protein 0.03 Orthogroups_2024-Update
Bradi1g45747 No alias GRAM domain family protein 0.02 Orthogroups_2024-Update
Glyma.18G145300 No alias GRAM domain family protein 0.03 Orthogroups_2024-Update
PSME_00003496-RA No alias (at5g13200 : 133.0) GRAM domain family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00032988-RA No alias (at5g13200 : 149.0) GRAM domain family protein; CONTAINS... 0.04 Orthogroups_2024-Update
PSME_00036937-RA No alias (at5g13200 : 189.0) GRAM domain family protein; CONTAINS... 0.02 Orthogroups_2024-Update
Potri.004G068000 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0010011 auxin binding IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0042562 hormone binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004182 GRAM 122 242
No external refs found!