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  5. Seita.9G101900.1

Seita.9G101900.1


Description : Unknown function


Gene families : OG_42_0009486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G101900.1
Cluster HCAA Clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
Seita.9G102300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G172100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 201 287
IPR002110 Ankyrin_rpt 16 100
IPR002110 Ankyrin_rpt 334 366
IPR026961 PGG_dom 425 530
No external refs found!