1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G113200.1

Seita.9G113200.1


Description : MYB class-R2R3 subgroup-21 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G113200.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
100734 No alias myb domain protein 119 0.03 Orthogroups_2024-Update
A4A49_29942 No alias transcription factor myb44 0.02 Orthogroups_2024-Update
Bradi2g23341 No alias myb domain protein 3r-5 0.03 Orthogroups_2024-Update
Bradi2g31887 No alias Homeodomain-like protein 0.03 Orthogroups_2024-Update
Brara.A00517.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.03 Orthogroups_2024-Update
Brara.H02151.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
Brara.I03324.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G093660 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Glyma.14G086500 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Glyma.19G085700 No alias myb domain protein 52 0.04 Orthogroups_2024-Update
HORVU5Hr1G049880.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Kfl00043_0140 kfl00043_0140_v1.1 (at5g58850 : 99.8) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
Kfl00048_0440 kfl00048_0440_v1.1 (at4g18770 : 122.0) MYB98 is a member of the R2R3-MYB... 0.02 Orthogroups_2024-Update
LOC_Os01g12860 No alias MYB family transcription factor, putative, expressed 0.06 Orthogroups_2024-Update
LOC_Os03g51110 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_4704g0010 No alias (at1g26780 : 223.0) Encodes LOF1 (LATERAL ORGAN... 0.04 Orthogroups_2024-Update
PSME_00006895-RA No alias (at1g22640 : 178.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00025751-RA No alias (at3g50060 : 193.0) Encodes a member of the R2R3... 0.04 Orthogroups_2024-Update
Potri.007G134500 No alias myb domain protein 52 0.05 Orthogroups_2024-Update
Potri.014G035100 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Pp1s120_159V6 No alias myb3r-4 (myb domain protein 3r-4) dna binding... 0.03 Orthogroups_2024-Update
Pp1s39_301V6 No alias r2r3-myb transcription 0.04 Orthogroups_2024-Update
Solyc04g078420 No alias R2R3MYB transcription factor 70 0.04 Orthogroups_2024-Update
evm.model.tig00020780.48 No alias (at4g32730 : 246.0) Encodes a putative c-myb-like... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 56 99
IPR001005 SANT/Myb 4 50
No external refs found!