1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G130100.1

Seita.9G130100.1


Description : arabinogalactan protein *(Xylogen)


Gene families : OG_42_0000300 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000300_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G130100.1
Cluster HCAA Clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
At4g14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Orthogroups_2024-Update
Bradi1g55770 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 Orthogroups_2024-Update
Brara.B00307.1 No alias arabinogalactan protein *(Xylogen) 0.04 Orthogroups_2024-Update
GRMZM2G065640 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Glyma.20G049800 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
MA_139470g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00054093-RA No alias (at4g14815 : 85.5) Bifunctional inhibitor/lipid-transfer... 0.05 Orthogroups_2024-Update
Potri.002G050300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Orthogroups_2024-Update
Pp1s139_88V6 No alias Non-specific lipid-transfer protein 0.03 Orthogroups_2024-Update
Pp1s239_57V6 No alias F16J14.16; protease inhibitor/seed storage/lipid... 0.02 Orthogroups_2024-Update
Seita.9G058400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G059500.1 No alias arabinogalactan protein *(Xylogen) 0.03 Orthogroups_2024-Update
Sobic.002G049500.1 No alias arabinogalactan protein *(Xylogen) 0.08 Orthogroups_2024-Update
Sopen03g001220 No alias Probable lipid transfer 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 12 111
No external refs found!