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  5. Seita.9G139100.1

Seita.9G139100.1


Description : RNA chaperone *(RZ1)


Gene families : OG_42_0000107 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G139100.1

Target Alias Description ECC score Gene Family Method Actions
Bradi1g12460 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Orthogroups_2024-Update
Bradi3g24720 No alias glycine-rich RNA-binding protein 3 0.03 Orthogroups_2024-Update
Solyc11g008210 No alias Glycine-rich RNA-binding family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g047360 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 115 131
IPR000504 RRM_dom 9 78
No external refs found!