1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G139900.1

Seita.9G139900.1


Description : Unknown function


Gene families : OG_42_0000377 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G139900.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Bradi1g75785 No alias ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Bradi4g02660 No alias ankyrin repeat family protein 0.02 Orthogroups_2024-Update
GRMZM6G289317 No alias ankyrin repeat family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G016230.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G099440.7 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G026640.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g29110 No alias ankyrin repeat family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g29140 No alias ankyrin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g47620 No alias ankyrin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g47670 No alias ankyrin repeat family protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os08g13640 No alias ankyrin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g03630 No alias ankyrin, putative, expressed 0.02 Orthogroups_2024-Update
Sobic.001G137800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0007265 Ras protein signal transduction IEP Predicted GO
BP GO:0007266 Rho protein signal transduction IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001440 TPR_1 398 431
IPR002110 Ankyrin_rpt 26 99
IPR002110 Ankyrin_rpt 185 260
IPR002110 Ankyrin_rpt 102 162
No external refs found!