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  5. Seita.9G144500.1

Seita.9G144500.1


Description : E3 ubiquitin ligase *(BRG)


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G144500.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
At1g10650 No alias Putative S-ribonuclease binding protein SBP1... 0.04 Orthogroups_2024-Update
Bradi3g52030 No alias SBP (S-ribonuclease binding protein) family protein 0.02 Orthogroups_2024-Update
Bradi5g08790 No alias SBP (S-ribonuclease binding protein) family protein 0.04 Orthogroups_2024-Update
GRMZM2G035821 No alias SBP (S-ribonuclease binding protein) family protein 0.02 Orthogroups_2024-Update
GRMZM5G818514 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
LOC_Os03g46570 No alias protein binding protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.012G119200 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Pp1s129_90V6 No alias F20B24.9; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s170_99V6 No alias atp binding 0.03 Orthogroups_2024-Update
Seita.2G104400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G084100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G084400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G143100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc08g077460 No alias SBP (S-ribonuclease binding protein) family protein... 0.03 Orthogroups_2024-Update
Sopen01g053650 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen08g026050 No alias Zinc finger, C3HC4 type (RING finger) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004474 malate synthase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!