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  5. Seita.9G148700.1

Seita.9G148700.1


Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G148700.1
Cluster HCAA Clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
A4A49_15205 No alias tubulin beta-2 chain 0.04 Orthogroups_2024-Update
At5g12250 No alias Tubulin beta chain [Source:UniProtKB/TrEMBL;Acc:A0A178UPR2] 0.03 Orthogroups_2024-Update
Bradi2g21340 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
Brara.K01811.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Potri.001G106100 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
Potri.009G067100 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Potri.009G067200 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Pp1s218_7V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s252_101V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s252_90V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Pp1s93_136V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Solyc06g035970 No alias Tubulin beta chain (AHRD V3.3 *** TBB_HORVU) 0.03 Orthogroups_2024-Update
Sopen04g035100 No alias Tubulin/FtsZ family, GTPase domain 0.02 Orthogroups_2024-Update
Sopen06g011750 No alias Tubulin/FtsZ family, GTPase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!