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  5. Seita.9G149300.1

Seita.9G149300.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G149300.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
58936 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
A4A49_03191 No alias lob domain-containing protein 15 0.03 Orthogroups_2024-Update
Brara.F02209.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.10G213500 No alias LOB domain-containing protein 1 0.03 Orthogroups_2024-Update
Glyma.14G021100 No alias LOB domain-containing protein 24 0.02 Orthogroups_2024-Update
Glyma.19G257300 No alias LOB domain-containing protein 11 0.03 Orthogroups_2024-Update
HORVU1Hr1G012720.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G088440.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.04 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.03 Orthogroups_2024-Update
Pp1s56_77V6 No alias ramosa 2 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 31 128
No external refs found!