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  5. Seita.9G153500.1

Seita.9G153500.1


Description : E3 ubiquitin ligase *(NLA)


Gene families : OG_42_0001676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001676_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G153500.1

Target Alias Description ECC score Gene Family Method Actions
At1g02860 No alias E3 ubiquitin-protein ligase BAH1... 0.02 Orthogroups_2024-Update
Brara.D02300.1 No alias E3 ubiquitin ligase *(NLA) 0.04 Orthogroups_2024-Update
Brara.J00136.1 No alias E3 ubiquitin ligase *(NLA) 0.03 Orthogroups_2024-Update
Potri.002G205400 No alias SPX (SYG1/Pho81/XPR1) domain-containing protein 0.04 Orthogroups_2024-Update
Potri.016G064600 No alias SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc... 0.02 Orthogroups_2024-Update
Solyc09g075040 No alias E3 ubiquitin-protein ligase (AHRD V3.3 *** K4CV81_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR027370 Znf-RING_LisH 238 284
No external refs found!