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  5. Seita.9G154800.1

Seita.9G154800.1


Description : Unknown function


Gene families : OG_42_0000164 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G154800.1
Cluster HCAA Clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
Bradi3g59260 No alias Glutaredoxin family protein 0.03 Orthogroups_2024-Update
Brara.C00137.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Glyma.04G141800 No alias Glutaredoxin family protein 0.03 Orthogroups_2024-Update
Glyma.09G239300 No alias Glutaredoxin family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G021100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G073040.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os01g61350 No alias glutaredoxin, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g46570 No alias glutaredoxin, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00051822-RA No alias (at5g03870 : 223.0) Glutaredoxin family protein;... 0.02 Orthogroups_2024-Update
PSME_00056215-RA No alias (at3g57070 : 229.0) Glutaredoxin family protein;... 0.02 Orthogroups_2024-Update
Potri.001G280400 No alias Glutaredoxin family protein 0.02 Orthogroups_2024-Update
Potri.009G075600 No alias Glutaredoxin family protein 0.03 Orthogroups_2024-Update
Seita.1G001800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G069500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g067400 No alias Glutaredoxin family protein (AHRD V3.3 *** AT5G39865.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 185 261
No external refs found!