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  5. Seita.9G156700.1

Seita.9G156700.1


Description : cyclic nucleotide-gated cation channel *(CNGC)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G156700.1
Cluster HCAA Clusters: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
84488 No alias cyclic nucleotide-gated cation channel 4 0.02 Orthogroups_2024-Update
A4A49_17367 No alias cyclic nucleotide-gated ion channel 1 0.02 Orthogroups_2024-Update
A4A49_20339 No alias cyclic nucleotide-gated ion channel 4 0.06 Orthogroups_2024-Update
A4A49_22015 No alias putative cyclic nucleotide-gated ion channel 15 0.02 Orthogroups_2024-Update
At1g19780 No alias Putative cyclic nucleotide-gated ion channel 8... 0.03 Orthogroups_2024-Update
At5g53130 No alias Cyclic nucleotide-gated ion channel 1... 0.06 Orthogroups_2024-Update
Brara.A02980.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.C03656.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.J00905.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.K00815.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Glyma.08G219300 No alias cyclic nucleotide gated channel 8 0.02 Orthogroups_2024-Update
Glyma.09G168700 No alias cyclic nucleotide-binding transporter 1 0.06 Orthogroups_2024-Update
Glyma.16G025300 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
HORVU7Hr1G079400.3 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
MA_10431327g0020 No alias (at5g54250 : 177.0) member of Cyclic nucleotide gated... 0.03 Orthogroups_2024-Update
MA_446575g0010 No alias (at2g28260 : 388.0) member of Cyclic nucleotide gated... 0.03 Orthogroups_2024-Update
Potri.015G034000 No alias cyclic nucleotide-binding transporter 1 0.04 Orthogroups_2024-Update
Pp1s211_70V6 No alias T3B23.7; cyclic nucleotide-regulated ion channel,... 0.03 Orthogroups_2024-Update
Pp1s68_102V6 No alias cyclic nucleotide and calmodulin-regulated ion channel 0.02 Orthogroups_2024-Update
Pp1s90_245V6 No alias cyclic nucleotide-gated ion 0.03 Orthogroups_2024-Update
Sobic.008G173700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Sobic.010G153700.2 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc09g007840 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.02 Orthogroups_2024-Update
Sopen02g033280 No alias Cyclic nucleotide-binding domain 0.03 Orthogroups_2024-Update
Sopen05g028790 No alias Ion transport protein 0.02 Orthogroups_2024-Update
Sopen07g002590 No alias Ion transport protein 0.04 Orthogroups_2024-Update
Sopen08g022780 No alias Ion transport protein 0.02 Orthogroups_2024-Update
Sopen09g002680 No alias Ion transport protein 0.02 Orthogroups_2024-Update
evm.model.tig00021244.33 No alias (at4g30560 : 102.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
evm.model.tig00021348.58 No alias (at1g19780 : 96.3) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA 16Dec
BP GO:0006811 ion transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 89 414
IPR000595 cNMP-bd_dom 513 597
No external refs found!