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  5. Seita.9G159700.1

Seita.9G159700.1


Description : component *(VPS2/CHMP2) of ESCRT-III complex


Gene families : OG_42_0001019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G159700.1
Cluster HCAA Clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Brara.C04057.1 No alias component *(VPS2/CHMP2) of ESCRT-III complex 0.02 Orthogroups_2024-Update
Glyma.03G164800 No alias vacuolar protein sorting-associated protein 2.3 0.05 Orthogroups_2024-Update
Potri.001G442500 No alias SNF7 family protein 0.03 Orthogroups_2024-Update
Sopen12g003990 No alias Snf7 0.02 Orthogroups_2024-Update
evm.model.tig00020510.41 No alias (at2g06530 : 207.0) VPS2.1; CONTAINS InterPro DOMAIN/s:... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR005024 Snf7_fam 18 185
No external refs found!