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  5. Seita.9G165100.1

Seita.9G165100.1


Description : RBR-Ariadne-class E3 ubiquitin ligase


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G165100.1
Cluster HCAA Clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
At1g65430 No alias RBR-type E3 ubiquitin transferase... 0.03 Orthogroups_2024-Update
Cre17.g721950 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Sobic.005G208600.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.005G210000.1 No alias RBR-Ariadne-class E3 ubiquitin ligase & component... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 203 268
IPR002867 IBR_dom 284 326
No external refs found!