1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G172700.1

Seita.9G172700.1


Description : Unknown function


Gene families : OG_42_0008843 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008843_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G172700.1
Cluster HCAA Clusters: Cluster_225


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003852 2-isopropylmalate synthase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
BP GO:0006551 leucine metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009098 leucine biosynthetic process IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Predicted GO
BP GO:0043484 regulation of RNA splicing IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0050684 regulation of mRNA processing IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0080009 mRNA methylation IEP Predicted GO
BP GO:1903311 regulation of mRNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 437 482
IPR002885 Pentatricopeptide_repeat 363 412
IPR002885 Pentatricopeptide_repeat 933 975
IPR002885 Pentatricopeptide_repeat 574 622
IPR002885 Pentatricopeptide_repeat 997 1039
IPR002885 Pentatricopeptide_repeat 825 869
IPR002885 Pentatricopeptide_repeat 645 693
IPR002885 Pentatricopeptide_repeat 259 307
IPR002885 Pentatricopeptide_repeat 752 798
IPR002885 Pentatricopeptide_repeat 720 747
IPR002885 Pentatricopeptide_repeat 541 570
IPR002885 Pentatricopeptide_repeat 228 256
IPR002885 Pentatricopeptide_repeat 880 929
IPR002885 Pentatricopeptide_repeat 325 356
IPR002885 Pentatricopeptide_repeat 500 526
No external refs found!