Seita.9G187700.1

Description : subfamily ABCG transporter

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.9G187700.1
Cluster	HCAA Clusters: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
A4A49_33262	No alias	abc transporter g family member 32	0.03	Orthogroups_2024-Update
Bradi1g26040	No alias	pleiotropic drug resistance 6	0.02	Orthogroups_2024-Update
Bradi1g78752	No alias	pleiotropic drug resistance 5	0.03	Orthogroups_2024-Update
Bradi2g10110	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Bradi3g41987	No alias	pleiotropic drug resistance 11	0.03	Orthogroups_2024-Update
LOC_Os01g08260	No alias	pleiotropic drug resistance protein 4, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g16458	No alias	pleiotropic drug resistance protein 4, putative, expressed	0.02	Orthogroups_2024-Update
Seita.9G283100.1	No alias	subfamily ABCG transporter	0.06	Orthogroups_2024-Update
Sobic.003G215600.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Solyc05g018510	No alias	Drug resistance transporter-like ABC domain protein...	0.03	Orthogroups_2024-Update
Solyc06g065670	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
BP	GO:0048364	root development	IEP	Predicted GO
BP	GO:0048367	shoot system development	IEP	Predicted GO
BP	GO:0048731	system development	IEP	Predicted GO
BP	GO:0099402	plant organ development	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR029481	ABC_trans_N	47	126
IPR013525	ABC_2_trans	486	697
IPR013525	ABC_2_trans	1129	1340
IPR003439	ABC_transporter-like	831	982
IPR003439	ABC_transporter-like	152	335
IPR013581	PDR_assoc	702	758

External Links

No external refs found!