At4g38000

Description : DOF4.7 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K8]

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g38000
Cluster	HCCA clusters: Cluster_214

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15151	No alias	dof zinc finger protein dof2.4	0.02	Orthogroups_2024-Update
Bradi5g18640	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Brara.B00052.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.C01888.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.E02083.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F01530.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.I01305.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
GRMZM2G042218	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.11G151497	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G329000	No alias	TARGET OF MONOPTEROS 6	0.04	Orthogroups_2024-Update
Glyma.15G082400	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.18G260500	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.19G023200	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
HORVU4Hr1G074990.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU5Hr1G021290.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
MA_123810g0010	No alias	(at5g60850 : 129.0) Encodes a zinc finger protein.; OBF...	0.02	Orthogroups_2024-Update
MA_18267g0010	No alias	(at5g62940 : 141.0) HCA2 induces the formation of...	0.03	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.02	Orthogroups_2024-Update
Potri.002G129600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.004G056900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.019G040700	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Pp1s69_113V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.3G371900.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Seita.9G033400.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.001G078700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.003G033500.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc05g054510	No alias	Dof zinc finger protein (AHRD V3.3 *** A0A0K9PZW2_ZOSMR)	0.03	Orthogroups_2024-Update
Sopen06g032440	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Predicted GO
BP	GO:0007062	sister chromatid cohesion	IEP	Predicted GO
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Predicted GO
CC	GO:0009507	chloroplast	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
BP	GO:0015858	nucleoside transport	IEP	Predicted GO
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
BP	GO:0022402	cell cycle process	IEP	Predicted GO
CC	GO:0031390	Ctf18 RFC-like complex	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
BP	GO:1901264	carbohydrate derivative transport	IEP	Predicted GO
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Predicted GO
BP	GO:1901642	nucleoside transmembrane transport	IEP	Predicted GO
BP	GO:1903047	mitotic cell cycle process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	40	95

External Links

No external refs found!

At4g38000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation