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  5. Seita.9G203000.1

Seita.9G203000.1


Description : Unknown function


Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G203000.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G297800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Orthogroups_2024-Update
Sopen07g028040 No alias PPR repeat 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 165 210
IPR002885 Pentatricopeptide_repeat 134 163
IPR002885 Pentatricopeptide_repeat 346 372
No external refs found!