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  5. Seita.9G204800.1

Seita.9G204800.1


Description : Unknown function


Gene families : OG_42_0000929 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G204800.1
Cluster HCAA Clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14190 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
Bradi2g38453 No alias rna processing factor 2 0.04 Orthogroups_2024-Update
HORVU1Hr1G013810.1 No alias Unknown function 0.07 Orthogroups_2024-Update
HORVU1Hr1G014030.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G058000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G204600.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Sobic.002G054200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G024600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G027600.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G027680.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.005G168000.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 305 353
IPR002885 Pentatricopeptide_repeat 163 209
IPR002885 Pentatricopeptide_repeat 378 424
IPR002885 Pentatricopeptide_repeat 235 284
IPR002885 Pentatricopeptide_repeat 480 528
IPR002885 Pentatricopeptide_repeat 96 124
IPR002885 Pentatricopeptide_repeat 442 473
No external refs found!