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  5. Seita.9G212900.1

Seita.9G212900.1


Description : Unknown function


Gene families : OG_42_0000247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G212900.1
Cluster HCAA Clusters: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Bradi4g32570 No alias GRAM domain family protein 0.03 Orthogroups_2024-Update
Brara.C00346.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.10G287100 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.02 Orthogroups_2024-Update
Glyma.20G102200 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
LOC_Os04g44510 No alias GEM, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00024381-RA No alias (at5g13200 : 283.0) GRAM domain family protein; CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00032988-RA No alias (at5g13200 : 149.0) GRAM domain family protein; CONTAINS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004182 GRAM 92 209
No external refs found!