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  5. Seita.9G213700.1

Seita.9G213700.1


Description : component *(NBS1) of DNA resection MRE11-RAD50-NBS1 (MRN) complex & component *(NBS1) of MRE11-RAD50-NBS1 (MRN) complex


Gene families : OG_42_0009173 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G213700.1
Cluster HCAA Clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
A4A49_26306 No alias nijmegen breakage syndrome 1 protein 0.03 Orthogroups_2024-Update
Glyma.02G239200 No alias nijmegen breakage syndrome 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0019627 urea metabolic process IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0035550 urease complex IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043419 urea catabolic process IEP Predicted GO
BP GO:0043605 cellular amide catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000253 FHA_dom 25 110
No external refs found!