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  5. Seita.9G227400.1

Seita.9G227400.1


Description : catalytic component *(CesA) of cellulose synthase complex


Gene families : OG_42_0000159 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G227400.1
Cluster HCAA Clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
75715 No alias Cellulose synthase family protein 0.03 Orthogroups_2024-Update
A4A49_22443 No alias cellulose synthase a catalytic subunit 8 [udp-forming] 0.05 Orthogroups_2024-Update
At4g32410 No alias Cellulose synthase [Source:UniProtKB/TrEMBL;Acc:A0A178UWT4] 0.04 Orthogroups_2024-Update
Bradi2g49912 No alias cellulose synthase family protein 0.03 Orthogroups_2024-Update
Bradi3g28350 No alias cellulose synthase A4 0.04 Orthogroups_2024-Update
Bradi4g30540 No alias Cellulose synthase family protein 0.08 Orthogroups_2024-Update
Brara.F03770.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.04 Orthogroups_2024-Update
GRMZM2G027723 No alias cellulose synthase 1 0.04 Orthogroups_2024-Update
Glyma.13G126000 No alias cellulose synthase A4 0.03 Orthogroups_2024-Update
HORVU0Hr1G011610.1 No alias mannan synthase *(CSLD) 0.04 Orthogroups_2024-Update
PSME_00003324-RA No alias (at5g44030 : 1405.0) Encodes a cellulose synthase... 0.05 Orthogroups_2024-Update
PSME_00003722-RA No alias (at4g18780 : 1327.0) Encodes a member of the cellulose... 0.04 Orthogroups_2024-Update
PSME_00015179-RA No alias (at5g17420 : 1472.0) Encodes a xylem-specific cellulose... 0.05 Orthogroups_2024-Update
PSME_00036267-RA No alias (at5g17420 : 551.0) Encodes a xylem-specific cellulose... 0.03 Orthogroups_2024-Update
Potri.002G257900 No alias cellulose synthase A4 0.03 Orthogroups_2024-Update
Potri.004G059600 No alias cellulose synthase family protein 0.03 Orthogroups_2024-Update
Potri.006G181900 No alias Cellulose synthase family protein 0.03 Orthogroups_2024-Update
Seita.2G099400.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.03 Orthogroups_2024-Update
Sobic.001G224300.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.08 Orthogroups_2024-Update
Sobic.002G205500.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.1 Orthogroups_2024-Update
Sobic.003G296400.1 No alias catalytic component *(CesA) of cellulose synthase complex 0.09 Orthogroups_2024-Update
Solyc01g087210 No alias Cellulose synthase family protein (AHRD V3.3 *** AT5G05170.1) 0.02 Orthogroups_2024-Update
Solyc09g072820 No alias Cellulose synthase (AHRD V3.3 *** M5VVD4_PRUPE) 0.03 Orthogroups_2024-Update
Solyc12g056580 No alias Cellulose synthase (AHRD V3.3 *** M1AQH6_SOLTU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0016760 cellulose synthase (UDP-forming) activity IEA 16Dec
BP GO:0030244 cellulose biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR027934 CES_Znf_RING 31 100
IPR005150 Cellulose_synth 309 1067
No external refs found!