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  5. Seita.9G229700.1

Seita.9G229700.1


Description : EC_3.2 glycosylase & beta amylase


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G229700.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
At4g15210 No alias Beta-amylase 5 [Source:UniProtKB/Swiss-Prot;Acc:P25853] 0.03 Orthogroups_2024-Update
Bradi1g75610 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
LOC_Os07g47120 No alias beta-amylase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10432035g0010 No alias (at3g23920 : 650.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
Mp1g06910.1 No alias beta amylase 0.02 Orthogroups_2024-Update
Mp5g02130.1 No alias beta amylase 0.02 Orthogroups_2024-Update
Mp8g10500.1 No alias beta amylase 0.03 Orthogroups_2024-Update
PSME_00015611-RA No alias (at4g17090 : 549.0) Encodes a beta-amylase targeted to... 0.03 Orthogroups_2024-Update
PSME_00015945-RA No alias (at3g23920 : 523.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
PSME_00017705-RA No alias (at4g17090 : 655.0) Encodes a beta-amylase targeted to... 0.04 Orthogroups_2024-Update
PSME_00049129-RA No alias (at3g23920 : 726.0) Encodes a chloroplast beta-amylase.... 0.03 Orthogroups_2024-Update
PSME_00055756-RA No alias (at3g23920 : 272.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
Potri.003G143500 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Pp1s9_318V6 No alias beta-amylase 0.02 Orthogroups_2024-Update
Solyc01g067660 No alias 1,4-alpha-glucan-maltohydrolase 0.02 Orthogroups_2024-Update
Solyc09g091030 No alias Beta-amylase 1 0.03 Orthogroups_2024-Update
Sopen08g003080 No alias Glycosyl hydrolase family 14 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA 16Dec
MF GO:0016161 beta-amylase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 85 505
No external refs found!