1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At4g38420

At4g38420


Description : Putative pectinesterase [Source:UniProtKB/TrEMBL;Acc:Q8VYB3]


Gene families : OG_42_0000592 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g38420
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
A4A49_10416 No alias l-ascorbate oxidase-like protein 0.04 Orthogroups_2024-Update
A4A49_21189 No alias l-ascorbate oxidase-like protein 0.03 Orthogroups_2024-Update
Brara.B02254.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.F01454.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.G01210.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Brara.H00528.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Glyma.11G097300 No alias SKU5 similar 5 0.05 Orthogroups_2024-Update
Glyma.12G023300 No alias SKU5 similar 5 0.04 Orthogroups_2024-Update
LOC_Os07g32660 No alias monocopper oxidase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00000925-RA No alias (at4g22010 : 780.0) SKU5 similar 4 (sks4); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00018830-RA No alias (at1g76160 : 662.0) SKU5 similar 5 (sks5); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00026246-RA No alias (at1g76160 : 713.0) SKU5 similar 5 (sks5); FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
Potri.002G013700 No alias SKU5 similar 5 0.04 Orthogroups_2024-Update
Potri.004G010100 No alias SKU5 similar 4 0.03 Orthogroups_2024-Update
Potri.014G154500 No alias SKU5 similar 4 0.06 Orthogroups_2024-Update
Seita.4G261600.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Solyc01g111970 No alias L-ascorbate oxidase-like protein (AHRD V3.3 *** W9RW65_9ROSA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 385 521
IPR001117 Cu-oxidase 162 299
IPR011707 Cu-oxidase_3 36 149
No external refs found!