1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G243700.1

Seita.9G243700.1


Description : Unknown function


Gene families : OG_42_0000093 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G243700.1
Cluster HCAA Clusters: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Brara.D00061.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g52314 No alias BTB1 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g19270 No alias universal stress protein domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os12g36640 No alias universal stress protein domain containing protein,... 0.02 Orthogroups_2024-Update
Sobic.001G363100.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0005484 SNAP receptor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR006016 UspA 2 160
No external refs found!