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  5. Seita.9G252100.1

Seita.9G252100.1


Description : Unknown function


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G252100.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G089736 No alias TIFY domain/Divergent CCT motif family protein 0.03 Orthogroups_2024-Update
Glyma.09G071600 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Glyma.13G112000 No alias jasmonate-zim-domain protein 1 0.03 Orthogroups_2024-Update
Glyma.15G179600 No alias jasmonate-zim-domain protein 1 0.04 Orthogroups_2024-Update
Glyma.16G010000 No alias jasmonate-zim-domain protein 6 0.05 Orthogroups_2024-Update
LOC_Os03g08330 No alias ZIM domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g25230 No alias ZIM domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Seita.9G371000.1 No alias component *(JAZ) of jasmonic acid receptor complex &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR018467 CCT_CS 119 143
IPR010399 Tify_dom 71 103
No external refs found!