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  5. Seita.9G252300.1

Seita.9G252300.1


Description : Unknown function


Gene families : OG_42_0000349 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G252300.1
Cluster HCAA Clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Bradi1g72600 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
Glyma.09G071600 No alias jasmonate-zim-domain protein 1 0.02 Orthogroups_2024-Update
MA_1854g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00024561-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Seita.9G251600.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G518100.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G259600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G259700.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G259900.1 No alias TIFY-type transcription factor 0.03 Orthogroups_2024-Update
Solyc12g009220 No alias jasmonate ZIM-domain protein 1 0.02 Orthogroups_2024-Update
Sopen07g021770 No alias tify domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR010399 Tify_dom 71 103
IPR018467 CCT_CS 110 134
No external refs found!