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  5. Seita.9G273500.1

Seita.9G273500.1


Description : substrate adaptor *(SKIP30) of SCF E3 ubiquitin ligase complex


Gene families : OG_42_0003163 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G273500.1
Cluster HCAA Clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Bradi3g47920 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Orthogroups_2024-Update
Brara.A02891.1 No alias substrate adaptor *(SKIP30) of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Potri.002G050600 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006652 Kelch_1 281 333
IPR006652 Kelch_1 150 196
IPR006652 Kelch_1 94 147
IPR001810 F-box_dom 7 42
No external refs found!