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  5. Seita.9G279900.1

Seita.9G279900.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000462 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G279900.1
Cluster HCAA Clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
34456 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
A4A49_04246 No alias glucan endo-1,3-beta-glucosidase 14 0.03 Orthogroups_2024-Update
Bradi3g20770 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G127117 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G218300 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G021950.5 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Mp7g03940.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Orthogroups_2024-Update
Potri.001G449100 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Sobic.004G083100.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 27 349
No external refs found!