1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.9G285700.1

Seita.9G285700.1


Description : EC_5.2 cis-trans-isomerase


Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G285700.1
Cluster HCAA Clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
At2g29960 No alias Peptidyl-prolyl cis-trans isomerase CYP19-4... 0.03 Orthogroups_2024-Update
Bradi3g01990 No alias Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.03 Orthogroups_2024-Update
Brara.F03904.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2... 0.06 Orthogroups_2024-Update
Brara.H01845.1 No alias peptidyl-prolyl cis-trans isomerase *(ROC1/2/3) & EC_5.2... 0.03 Orthogroups_2024-Update
GRMZM2G401848 No alias rotamase CYP 3 0.03 Orthogroups_2024-Update
Kfl00289_0160 kfl00289_0160_v1.1 (q41651|cypb_vicfa : 197.0) Peptidyl-prolyl cis-trans... 0.02 Orthogroups_2024-Update
Mp7g15930.1 No alias component PnsL5 of NDH lumen subcomplex L. protein... 0.02 Orthogroups_2024-Update
Potri.T051300 No alias rotamase cyclophilin 2 0.03 Orthogroups_2024-Update
Seita.1G109300.1 No alias EC_5.2 cis-trans-isomerase 0.03 Orthogroups_2024-Update
Sobic.001G264700.1 No alias EC_5.2 cis-trans-isomerase 0.06 Orthogroups_2024-Update
Sopen06g033370 No alias Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 0.02 Orthogroups_2024-Update
evm.model.contig_4404.13 No alias (at3g63400 : 126.0) Cyclophilin-like peptidyl-prolyl... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA 16Dec
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 13 178
No external refs found!