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  5. Seita.9G299300.1

Seita.9G299300.1


Description : Unknown function


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G299300.1
Cluster HCAA Clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Bradi4g23090 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 Orthogroups_2024-Update
Bradi4g23252 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU6Hr1G059780.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g36010 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os11g09510 No alias OsFBX403 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g09600 No alias OsFBX405 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g09680 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os11g12480 No alias OsFBL54 - F-box domain and LRR containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.3G255100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G031700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G230700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G106400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G148400.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0017148 negative regulation of translation IEP Predicted GO
MF GO:0030597 RNA glycosylase activity IEP Predicted GO
MF GO:0030598 rRNA N-glycosylase activity IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!