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  5. Seita.9G310000.1

Seita.9G310000.1


Description : substrate adaptor *(HTD1/DWD1) of CUL4-based E3 ubiquitin ligase complex


Gene families : OG_42_0002836 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002836_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G310000.1
Cluster HCAA Clusters: Cluster_5


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 249 282
IPR001680 WD40_repeat 291 325
IPR001680 WD40_repeat 339 374
IPR022052 Histone-bd_RBBP4_N 43 110
No external refs found!