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  5. Seita.9G312600.1

Seita.9G312600.1


Description : regulatory protein *(SUO) of miRNA biogenesis pathway


Gene families : OG_42_0002194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G312600.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At3g48050 No alias Protein SUO [Source:UniProtKB/TrEMBL;Acc:F4JCS8] 0.03 Orthogroups_2024-Update
Bradi3g59577 No alias BAH domain ;TFIIS helical bundle-like domain 0.04 Orthogroups_2024-Update
GRMZM2G162859 No alias BAH domain ;TFIIS helical bundle-like domain 0.03 Orthogroups_2024-Update
HORVU0Hr1G017170.3 No alias regulatory protein *(SUO) of miRNA biogenesis pathway 0.03 Orthogroups_2024-Update
MA_10428034g0020 No alias (at3g48050 : 451.0) BAH domain ;TFIIS helical... 0.05 Orthogroups_2024-Update
Mp4g16230.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Sobic.001G289600.1 No alias regulatory protein *(SUO) of miRNA biogenesis pathway 0.03 Orthogroups_2024-Update
Sobic.001G289800.2 No alias regulatory protein *(SUO) of miRNA biogenesis pathway 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009411 response to UV IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017923 TFIIS_N 390 439
No external refs found!