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  5. Seita.9G326900.1

Seita.9G326900.1


Description : Unknown function


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G326900.1
Cluster HCAA Clusters: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G088140.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G092910.2 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00005304-RA No alias (q6h676|exb11_orysa : 186.0) Expansin-B11 precursor... 0.02 Orthogroups_2024-Update
PSME_00039752-RA No alias (q7x6j9|exb17_orysa : 251.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Seita.9G327100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G300700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G300800.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G542100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G191600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 69 149
IPR007117 Expansin_CBD 162 249
No external refs found!