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  5. Seita.9G335000.1

Seita.9G335000.1


Description : Unknown function


Gene families : OG_42_0000466 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G335000.1
Cluster HCAA Clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
Bradi2g08420 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi2g08450 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi4g13420 No alias Function unknown 0.05 Orthogroups_2024-Update
GRMZM2G016754 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU0Hr1G039930.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g14180 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os05g16110 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os05g39160 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os05g39180 No alias expressed protein 0.03 Orthogroups_2024-Update
Sobic.003G001901.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G217800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011676 DUF1618 200 339
No external refs found!