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  5. Seita.9G337400.1

Seita.9G337400.1


Description : Unknown function


Gene families : OG_42_0005846 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G337400.1

Target Alias Description ECC score Gene Family Method Actions
PSME_00019987-RA No alias (at1g75560 : 301.0) zinc knuckle (CCHC-type) family... 0.01 Orthogroups_2024-Update
PSME_00038677-RA No alias (at1g75560 : 300.0) zinc knuckle (CCHC-type) family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0072546 ER membrane protein complex IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 59 74
IPR001878 Znf_CCHC 41 56
IPR001878 Znf_CCHC 233 249
IPR001878 Znf_CCHC 97 112
IPR001878 Znf_CCHC 142 158
IPR001878 Znf_CCHC 77 94
IPR001878 Znf_CCHC 212 227
IPR001878 Znf_CCHC 161 177
No external refs found!