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  5. Seita.9G339600.1

Seita.9G339600.1


Description : alpha-like-class expansin


Gene families : OG_42_0003075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G339600.1
Cluster HCAA Clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
A4A49_29774 No alias expansin-like a2 0.04 Orthogroups_2024-Update
Bradi1g76260 No alias expansin-like A1 0.03 Orthogroups_2024-Update
Brara.A00006.1 No alias alpha-like-class expansin 0.04 Orthogroups_2024-Update
Glyma.12G022800 No alias expansin-like A1 0.03 Orthogroups_2024-Update
PSME_00005824-RA No alias (at3g45970 : 189.0) member of EXPANSIN-LIKE. Naming... 0.03 Orthogroups_2024-Update
Sobic.001G311000.1 No alias alpha-like-class expansin 0.03 Orthogroups_2024-Update
Solyc01g112000 No alias expansin-like protein precursor 1 0.02 Orthogroups_2024-Update
Sopen01g054050 No alias Pollen allergen 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 63 133
IPR007117 Expansin_CBD 155 237
No external refs found!