At4g39410

Description : WRKY13 [Source:UniProtKB/TrEMBL;Acc:A0A178UV80]

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g39410
Cluster	HCCA clusters: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
77979	No alias	WRKY DNA-binding protein 35	0.02	Orthogroups_2024-Update
At5g24110	No alias	Probable WRKY transcription factor 30...	0.03	Orthogroups_2024-Update
Bradi2g11170	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Bradi4g30372	No alias	WRKY DNA-binding protein 18	0.03	Orthogroups_2024-Update
Bradi5g17395	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Brara.A01631.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Brara.A03925.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B00234.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B01850.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C04031.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02346.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02837.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E01296.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F00929.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G02914.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G03696.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02227.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02900.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G022970.2	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G124320.9	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
MA_126273g0010	No alias	(at1g69310 : 166.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00025597-RA	No alias	(at1g29280 : 167.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00028885-RA	No alias	(at5g15130 : 194.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00036434-RA	No alias	(at1g62300 : 153.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00041150-RA	No alias	(at4g04450 : 119.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00049059-RA	No alias	(at1g29860 : 114.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.016G137900	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Pp1s5_354V6	No alias	wrky transcription	0.03	Orthogroups_2024-Update
Sobic.005G013400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G209200.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc03g007380	No alias	WRKY transcription factor 52	0.04	Orthogroups_2024-Update
Solyc04g051690	No alias	WRKY transcription factor 51	0.02	Orthogroups_2024-Update
Solyc05g012770	No alias	WRKY transcription factor 4	0.02	Orthogroups_2024-Update
Sopen04g028240	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen09g005680	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004451	isocitrate lyase activity	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
MF	GO:0008146	sulfotransferase activity	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Predicted GO
MF	GO:0016833	oxo-acid-lyase activity	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	223	279

External Links

No external refs found!

At4g39410

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation