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  5. Seita.9G373200.1

Seita.9G373200.1


Description : Unknown function


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G373200.1
Cluster HCAA Clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
101273 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
A4A49_18667 No alias ring-h2 finger protein atl18 0.03 Orthogroups_2024-Update
A4A49_40065 No alias ring-h2 finger protein atl70 0.02 Orthogroups_2024-Update
At4g35480 No alias RHA3B [Source:UniProtKB/TrEMBL;Acc:A0A178UXS9] 0.03 Orthogroups_2024-Update
Bradi1g29611 No alias RING-H2 finger A3A 0.07 Orthogroups_2024-Update
Bradi1g45727 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g38493 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g44733 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g46030 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g60770 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Bradi4g13960 No alias RING/U-box superfamily protein 0.07 Orthogroups_2024-Update
Brara.B00007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.B02006.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B02007.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.E02317.1 No alias regulatory ubiquitin-protein ligase *(PRU2) &... 0.02 Orthogroups_2024-Update
Brara.H01260.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.I04244.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G028234 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.04G222300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G245400 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Glyma.09G067900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G143350 No alias TOXICOS EN LEVADURA 2 0.02 Orthogroups_2024-Update
Glyma.11G231400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G014500 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU0Hr1G016510.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G072730.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU5Hr1G096480.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G091610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Kfl00034_0310 kfl00034_0310_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os05g40020 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_904294g0010 No alias (at1g72310 : 107.0) Encodes a putative RING-H2 zinc... 0.04 Orthogroups_2024-Update
Potri.008G018900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G076800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.4G173000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.002G189800.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G109600.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.004G181200.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc11g073170 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.02 Orthogroups_2024-Update
Sopen06g015390 No alias Ring finger domain 0.04 Orthogroups_2024-Update
evm.model.tig00000367.17 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 142
No external refs found!