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  5. Seita.9G375600.1

Seita.9G375600.1


Description : Unknown function


Gene families : OG_42_0006584 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.9G375600.1
Cluster HCAA Clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Sobic.001G347300.3 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019147 SWAP_N_domain 41 176
No external refs found!