At4g39780

Description : Ethylene-responsive transcription factor ERF060 [Source:UniProtKB/Swiss-Prot;Acc:O65665]

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g39780
Cluster	HCCA clusters: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.03	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.03	Orthogroups_2024-Update
A4A49_40092	No alias	ethylene-responsive transcription factor crf2	0.03	Orthogroups_2024-Update
AC187157.4_FG001	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
At1g22985	No alias	CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]	0.04	Orthogroups_2024-Update
At1g72360	No alias	Integrase-type DNA-binding superfamily protein...	0.03	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Bradi3g08790	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g18070	No alias	ethylene response factor 7	0.02	Orthogroups_2024-Update
Brara.B03207.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.C03619.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.F02721.1	No alias	subgroup ERF-V transcription factor	0.03	Orthogroups_2024-Update
Brara.H02380.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.07	Orthogroups_2024-Update
Brara.I01208.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.K01035.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G066158	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.02	Orthogroups_2024-Update
Glyma.14G111600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G145400	No alias	ethylene responsive element binding factor 1	0.05	Orthogroups_2024-Update
Glyma.19G163900	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
HORVU1Hr1G067110.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G071890.2	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G111550.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.04	Orthogroups_2024-Update
LOC_Os02g43970	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g32620	No alias	ethylene-responsive transcription factor ERF114,...	0.03	Orthogroups_2024-Update
LOC_Os06g08340	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_3405g0010	No alias	(q40476\|erf1_tobac : 120.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_436575g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_446533g0010	No alias	(at4g16750 : 126.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_65190g0010	No alias	(at5g19790 : 91.3) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_69434g0020	No alias	(q40479\|erf2_tobac : 84.0) Ethylene-responsive...	0.03	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.001G079900	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Potri.002G172200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G028000	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Pp1s132_34V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s19_272V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s2_404V6	No alias	erf2 transcription factor	0.02	Orthogroups_2024-Update
Seita.2G364700.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Seita.7G205100.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.7G262800.1	No alias	subgroup ERF-II-DEAR transcription factor	0.05	Orthogroups_2024-Update
Seita.8G237900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.9G320700.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G296300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G473900.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G081300.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Sobic.002G212000.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Sobic.004G227400.2	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G295700.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G014800.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Sobic.005G103000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Solyc03g093530	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.04	Orthogroups_2024-Update
Solyc03g093560	No alias	ethylene response factor C.6	0.03	Orthogroups_2024-Update
Solyc03g116610	No alias	Ethylene-responsive transcription factor WIN1 (AHRD V3.3...	0.04	Orthogroups_2024-Update
Solyc04g012050	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc09g089910	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen07g027720	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen12g022660	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002376	immune system process	IEP	Predicted GO
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
BP	GO:0006955	immune response	IEP	Predicted GO
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predicted GO
BP	GO:0045087	innate immune response	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	93	142

External Links

No external refs found!

At4g39780

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation